Disable the missing root warning by default
It can be re-enabled via the command-line option
--enable-missing-root-warning
But since this is usually a build system issue rather than something
end-users will need to worry about, let's not complain about it.
Note that this will _not_ suppress warnings generated if references
aren't resolved - so if you explicitly have a reference to something
in a dependency library and it's not found when linking, you'll still
get a warning.
Fixes: #825