fix(lint): resolve E410, E415, E510 in ocaml-git and github-oauth
- E410: fix doc style for of_string_exn, v, inflate, bool_codec,
access_token_url and 5 repository.mli @param missing periods
- E415: add pp to Config, Index, Repository types
- E510: add Logs source to Subtree module
- E331 auto-fixes: Config rename get_all→all, get_bool→bool,
get_int→int, find_sections→sections, get_remotes→remotes,
get_remote→remote, get_branches→branches, get_user→user;
cascading updates in repository, tests, fuzz, monopam, precommit
- Auto-fixes in freebox, gpt, hap